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Abstract Tolerance of chilling dictates the geographical distribution, establishment, and productivity of C4crops. Chilling reduces enzyme rate, limiting the sink for the absorbed light energy leading to the need for quick energy dissipation via non-photochemical quenching (NPQ). Here, we characterize NPQ upon chilling in threeMiscanthusaccessions representing diverse chilling tolerance in C4grasses. High chilling tolerant accessions accumulate substantial amounts of zeaxanthin during chilling nights in both field and growth chamber settings. Chilling-induced zeaxanthin accumulation in the dark enhances rate of NPQ induction by 66% in the following morning. Based on our data, the emerging ways for the unique regulation of NPQ include post-translational regulation of violaxanthin de-epoxidase (VDE), VDE cofactor accessibility, and absence of transcriptional upregulation of zeaxanthin conversion back to violaxanthin. In the future, more studies will be required to obtain further evidence for these ways contributions to the chilling-dark regulation of NPQ. Engineering dark accumulation of zeaxanthin will help improve crop chilling tolerance and promote sustainable production by allowing early spring planting to maximize the use of early-season soil moisture. Driving the engineered trait by chilling inducible promoter would ensure the minimization of a trade-off between photoprotection and photosynthesis efficiency.more » « less
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ABSTRACT Miscanthusholds a promise as a biocrop due to its high yield, perenniality and ability to grow on infertile soils. However, the current commercial biomass production ofMiscanthusis mostly limited to a single sterile triploid clone ofM.×giganteus. Nevertheless, parental species ofM.×giganteus, MiscanthussacchariflorusandMiscanthussinensiscontain vast genetic diversity for crop improvement. WithM. sacchariflorushaving a natural geographic distribution in cold‐temperate northeast China and eastern Russia, we hypothesised that it has substantial variation in physiological response to chilling. Using a semi‐high‐throughput method, we phenotyped 209M. sacchariflorusgenotypes belonging to six genetic groups for non‐photochemical quenching (NPQ) and photosystem II efficiency (ΦPSII) kinetics under warm and chilling treatments in three growing seasons. In response to the chilling treatment, all genetic groups exhibited an increase in NPQ induction rate indicating faster activation of NPQ in light. Notably, under chilling, the Korea/NE China/Russia 2x and N China 2x groups stood out for the highest NPQ rate in light and the highest steady‐state NPQ in light. This NPQ phenotype may contribute adaptation to chilling during bright, cold mornings of spring and early autumn in temperate climates, when faster NPQ would better protect from oxidative stress. Such enhanced adaptation could expand the growing season and thus productivity at a given location or expand the range of economically viable growing locations to higher latitudes and altitudes. A genome‐wide association study identified 126 unique SNPs associated with NPQ and ΦPSII traits. Among the identified candidate genes were enzymes involved in the ascorbate recycle and shikimate pathway, gamma‐aminobutyric acid and cation efflux transporters. Identifying natural variation and genes involved in NPQ and ΦPSII kinetics considerably enlarges the toolbox for breeding and/or engineeringMiscanthuswith optimised photosynthesis under warm and chilling conditions for sustainable feedstock production for bioenergy. Chilling affects the productivity and geographical distribution of most crops. Using a semi‐high‐throughput approach to investigate photosynthesis‐related traits, we characterised variation existing in the bioenergy cropMiscanthusunder chilling and warm conditions and identified potential genes associated with it. Under chilling, two genetic groups from the northern edge ofMiscanthusdistribution stood out for faster activation of photoprotection. This trait may contribute adaptation to chilling in temperate climates, when faster photoprotection would better defend from oxidative stress. Enhanced chilling adaptation could expand the growing season and thus productivity or enlarge the range of growing locations.more » « less
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Free, publicly-accessible full text available January 31, 2026
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Rising global food demand necessitates improved crop yields. Biostimulants offer a potential solution to meet these demands. Among them, antioxidants have shown potential to improve yield, nutritional quality, and resilience to climate change. However, large-scale production of many antioxidants is challenging. Here, we investigate Coenzyme M (CoM), a small, achiral antioxidant from archaea, as a potential biostimulant, investigating its effects on growth and physiology. CoM significantly increased shoot mass and root length of the model plant, Arabidopsis thaliana, in a concentration-dependent manner. Sulfur-containing CoM supplementation restored growth under sulfur-limited conditions in Arabidopsis, whereas similar recovery was not observed for other macronutrient deficiencies, consistent with it being metabolized. In tobacco, CoM increased photosynthetic light capture capacity, consistent with observed growth improvements. Interestingly, this effect was independent of carbon capture rates. Furthermore, CoM promoted early-stage shoot growth in various crops species, including tobacco, basil, cannabis, and soybean. Our results suggest CoM is a promising, scalable biostimulant with potential to modify photosynthesis and enhance crop productivity.more » « lessFree, publicly-accessible full text available January 24, 2026
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Abstract Water supply limitations will likely impose increasing restrictions on future crop production, underlining a need for crops that use less water per mass of yield. Water use efficiency (WUE) therefore becomes a key consideration in developing resilient and productive crops. In this study, we hypothesized that it is possible to improve WUE under drought conditions via modulation of chloroplast signals for stomatal opening by up-regulation of non-photochemical quenching (NPQ). Nicotiana tabacum plants with strong overexpression of the PsbS gene encoding PHOTOSYSTEM II SUBUNIT S, a key protein in NPQ, were grown under differing levels of drought. The PsbS-overexpressing lines lost 11% less water per unit CO2 fixed under drought and this did not have a significant effect on plant size. Depending on growth conditions, the PsbS-overexpressing lines consumed from 4–30% less water at the whole-plant level than the corresponding wild type. Leaf water and chlorophyll contents showed a positive relation with the level of NPQ. This study therefore provides proof of concept that up-regulation of NPQ can increase WUE, and as such is an important step towards future engineering of crops with improved performance under drought.more » « less
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Abstract Plant growth and resilience require balancing an inherently oxidative metabolism with powerful antioxidant systems that help maintain homeostasis. When the environment changes, reactive oxygen species are potent indicators of that change, allowing adaptation through re-balancing metabolism and antioxidant systems. A large body of evidence supports the use of exogenously applied antioxidants to improve both plant growth and their resilience to stress. Notably, some phenotypic effects are similar upon the application of chemically diverse antioxidants, while others are distinct. In this review, we analyze research from antioxidant treatment experiments and highlight the similarities in their practical applications and their effects on plant stress tolerance, photosynthesis, native antioxidant systems, and phytohormones. We also briefly cover the specific effects of individually applied antioxidants and what is known about their potential modes of action. Given the strong potential of antioxidant applications, we discuss research needed to promote their agricultural use. Finally, we identify outstanding questions about how the exogenous application of antioxidants mechanistically affects plant growth.more » « less
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Summary Phenotypic and genomic diversity inArabidopsis thalianamay be associated with adaptation along its wide elevational range, but it is unclear whether elevational clines are consistent among different mountain ranges.We took a multi‐regional view of selection associated with elevation. In a diverse panel of ecotypes, we measured plant traits under alpine stressors (low CO2partial pressure, high light, and night freezing) and conducted genome‐wide association studies.We found evidence of contrasting locally adaptive regional clines. Western Mediterranean ecotypes showed low water use efficiency (WUE)/early flowering at low elevations to high WUE/late flowering at high elevations. Central Asian ecotypes showed the opposite pattern. We mapped different candidate genes for each region, and some quantitative trait loci (QTL) showed elevational and climatic clines likely maintained by selection. Consistent with regional heterogeneity, trait and QTL clines were evident at regional scales (c. 2000 km) but disappeared globally. Antioxidants and pigmentation rarely showed elevational clines. High elevation east African ecotypes might have higher antioxidant activity under night freezing.Physiological and genomic elevational clines in different regions can be unique, underlining the complexity of local adaptation in widely distributed species, while hindering global trait–environment or genome–environment associations. To tackle the mechanisms of range‐wide local adaptation, regional approaches are thus warranted.more » « less
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